CellSim

CellSim is a Julia codebase for numerical simulations of cell mechanics. Its modules represent the cell cortex, nucleus, centrosome, and confining walls, with utilities for plotting and measuring simulation results.

YAML configuration files control parameters such as membrane elasticity, cortex viscosity, polymerization speed, confinement geometry, and nuclear mechanics. The repository includes configurations with and without a nucleus, parameter sweeps, and scripts for collecting and plotting metrics.

This is a research simulation codebase rather than a registered Julia package. The README provides environment setup and execution instructions; users should check its dependency requirements before running the examples.